Daniel Nüst
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3bdf7041dc
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sort and pretty print dataverse.json
so that we can track changes and only update the lines of the files that need updating
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2019-09-18 08:54:48 +02:00 |
Tim Head
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bfbec349c2
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[MRG] Add support for installing different versions of R (#772)
[MRG] Add support for installing different versions of R
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2019-09-18 08:15:11 +02:00 |
Tim Head
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548b9c8cde
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[MRG] Update nteract-on-jupyter to 2.1.3 (#794)
[MRG] Update nteract-on-jupyter to 2.1.3
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2019-09-18 08:12:16 +02:00 |
Tim Head
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c98e6ace78
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[MRG] Dataverse content provider (#739)
[MRG] Dataverse content provider
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2019-09-18 08:08:17 +02:00 |
Kacper Kowalik (Xarthisius)
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4df4fd6ab4
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Download individual files instead of zip bundle
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2019-09-17 15:44:56 -05:00 |
Kacper Kowalik (Xarthisius)
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a2f8228b15
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Match DV hosts based on netloc instead of url
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2019-09-16 15:03:12 -05:00 |
Kacper Kowalik (Xarthisius)
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30375d13df
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Use the persistent id from the url regardless whether it's a DOI or not
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2019-09-16 14:29:47 -05:00 |
Kacper Kowalik (Xarthisius)
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14b758d327
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Improve debug logging
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2019-09-16 09:17:15 -05:00 |
Tim Head
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b8dd98bd52
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Update nteract-on-jupyter to 2.1.3
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2019-09-13 22:28:44 +02:00 |
Kacper Kowalik (Xarthisius)
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063fd4dd9a
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Add a command for generating dataverse data file
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2019-09-13 13:42:41 -05:00 |
Kacper Kowalik (Xarthisius)
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8edafd0d07
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Add tests
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2019-09-13 13:42:41 -05:00 |
Kacper Kowalik (Xarthisius)
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331a610324
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Add Dataverse content provider
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2019-09-13 13:42:41 -05:00 |
Tim Head
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649a2c6726
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Merge pull request #792 from nuest/contentproviders/figshare_log
Add missing changelog entry
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2019-09-12 09:51:02 +02:00 |
Daniel Nüst
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15e8e9ccfb
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Add changelog entry for #788
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2019-09-12 08:27:29 +02:00 |
Tim Head
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e33d5f86ca
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[MRG] Add Figshare content provider (#788)
[MRG] Add Figshare content provider
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2019-09-11 22:17:39 +02:00 |
Daniel Nüst
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a40e1799bd
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fix content_id for Figshare
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2019-09-11 13:45:16 +02:00 |
Daniel Nüst
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f1ec646d2e
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add support for Figshare versions > 9
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2019-09-11 13:18:20 +02:00 |
Daniel Nüst
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698b8a1d7e
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try to improve test coverage
|
2019-09-11 13:17:48 +02:00 |
Tim Head
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efab51b314
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Update R version documentation
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2019-09-09 19:06:22 +02:00 |
Daniel Nüst
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b2b75600c0
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handle versions in Figshare properly
|
2019-09-09 08:37:02 +02:00 |
Tim Head
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57919b9b70
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Add script to compare Dockerfiles generated by current and older… (#785)
Add script to compare Dockerfiles generated by current and older version of repo2docker
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2019-09-08 22:26:56 +02:00 |
Tim Head
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2bbd8eed71
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[MRG] Add more test scenarios to Azure pipeline (#790)
[MRG] Add more test scenarios to Azure pipeline
|
2019-09-08 22:06:45 +02:00 |
Daniel Nüst
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b2b6030492
|
initialize hosts as instance variable
|
2019-09-08 21:39:48 +02:00 |
Daniel Nüst
|
5876439ea7
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add documentation how to compare Dockerfiles created between current and oder version of r2d
|
2019-09-08 21:22:37 +02:00 |
Daniel Nüst
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28261bed52
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add docs about building docs
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2019-09-08 21:22:37 +02:00 |
Tim Head
|
77ca9b9535
|
Add more test scenarios to Azure pipeline
|
2019-09-08 18:56:01 +02:00 |
Tim Head
|
d8c8259343
|
Raise exception for unsupported R versions
|
2019-09-08 17:19:50 +02:00 |
Tim Head
|
9af9b34937
|
[MRG] Restore the hooks directory when building the docker image (#786)
[MRG] Restore the hooks directory when building the docker image
|
2019-09-08 17:17:06 +02:00 |
Tim Head
|
9e9dd062bc
|
Restore the hooks directory when building the docker image
|
2019-09-08 17:11:28 +02:00 |
Tim Head
|
c50983532e
|
Use LooseVersion to compare versions instead of strings
|
2019-09-08 14:54:51 +02:00 |
Daniel Nüst
|
e6cd4b19d9
|
reuse hosts definition in Zenodo tests
|
2019-09-08 14:51:17 +02:00 |
Daniel Nüst
|
0e4029bb8d
|
add Figshare content provider
moving common functions to a DoiProvider
|
2019-09-08 14:51:17 +02:00 |
Tim Head
|
afb24a4a0d
|
use getpass.getuser instead of os.getlogin (#789)
use getpass.getuser instead of os.getlogin
|
2019-09-08 14:41:57 +02:00 |
Min RK
|
00b7706e1f
|
git needs to be set up
|
2019-09-08 12:34:11 +02:00 |
Min RK
|
f47acaa1bd
|
use getpass.getuser instead of os.getlogin
os.getlogin doesn't work everywhere (can raise OSError, inappropriate ioctl for device)
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2019-09-08 11:54:22 +02:00 |
Carol Willing
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3f8e56d0d9
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Add azure pipelines badge
|
2019-09-08 11:17:29 +02:00 |
Carol Willing
|
98de7d1630
|
Merge pull request #787 from willingc/test-pipe
Add baseline infra for Azure Pipelines
|
2019-09-08 11:10:17 +02:00 |
Carol Willing
|
b3c2c19a45
|
less tests
|
2019-09-08 10:31:08 +02:00 |
Carol Willing
|
f3d9ac4a85
|
Add azure pipelines for testing
|
2019-09-08 08:04:24 +02:00 |
Tim Head
|
75c2a24c0c
|
Print Dockerfile to stdout when --no-build (#784)
Print Dockerfile to stdout when --no-build
|
2019-09-08 07:30:11 +02:00 |
Tim Head
|
e646419e19
|
Merge pull request #517 from yuvipanda/help
Provide help text for commandline arguments
Co-authored-by: Min RK <benjaminrk@gmail.com>
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2019-09-08 07:29:49 +02:00 |
Tim Head
|
eae42740b6
|
Add tests for R version handling
|
2019-09-08 07:25:10 +02:00 |
Min RK
|
8e1bdd9765
|
only log Dockerfile at debug-level if not dry_run
avoids double-display when using --debug --no-build
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2019-09-07 14:28:14 +02:00 |
Min RK
|
e9c39e2596
|
respect self.log_level with json logs
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2019-09-07 14:25:25 +02:00 |
Min RK
|
7f0cac84b5
|
print Dockerfile to stdout when `--no-build`
Removes need to also specify `--debug` to see the dockerfile, which goes to the logs
|
2019-09-07 14:25:07 +02:00 |
Min RK
|
8ef5faa2ab
|
Merge pull request #779 from nuest/docker_daemon_logmessage
add explicit log message on failing Docker connection
|
2019-09-07 14:07:03 +02:00 |
Tim Head
|
484dbef959
|
Merge pull request #782 from minrk/dockerignore-hooks
add hooks to dockerignore
|
2019-09-07 14:01:59 +02:00 |
Min RK
|
28941f7900
|
add hooks to dockerignore
will hopefully fix dirty flag on docker hub
|
2019-09-07 13:57:47 +02:00 |
Min RK
|
088cf6e308
|
let black have its way
|
2019-09-07 13:34:07 +02:00 |
Tim Head
|
0b839428cc
|
Use new way of installing bioconductor
|
2019-09-07 13:30:46 +02:00 |