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1 621 Commity
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1621 Commity (c8cd3269c0a9265516fa13834f1ce0f77f732e3f)

Autor SHA1 Wiadomość Data
Daniel Nüst c8cd3269c0 add explicit log message on failing Docker connection, see #774 2019-09-07 09:22:00 +02:00
Tim Head b20eb6a84b
Merge pull request #771 from GeorgianaElena/fix_requirements_possible_encodings 
Handle different file encodings
 2019-08-30 17:09:38 +02:00
GeorgianaElena 75f4a70fec Black refactor 2019-08-30 11:26:48 +03:00
GeorgianaElena 5e4932b704 Added test for open_guess_encoding 2019-08-30 11:06:53 +03:00
GeorgianaElena 795769ee28 Removed debug print 2019-08-29 15:51:12 +03:00
GeorgianaElena 95fd0e5b81 Don't change file encoding 2019-08-29 15:13:33 +03:00
GeorgianaElena 3752fa1868 Added function to handle different file encodings 2019-08-28 16:25:12 +03:00
Tim Head 96cfc504ff
Merge pull request #770 from GeorgianaElena/upgrade_IRKernel 
[WIP] Upgrade IRKernel version to 1.0.2
 2019-08-26 18:38:43 +02:00
GeorgianaElena 5983ded5bb Upgrade IRKernel version to 1.0.2 2019-08-26 17:53:53 +03:00
Min RK 59795ecbda
Merge pull request #769 from kaust-vislab/miniconda-version-bump 
Bump Miniconda from 4.6.14 to 4.7.10
 2019-08-26 12:54:48 +02:00
pughdr 6de9bd4c69 Fixed merge conflict 2019-08-26 12:50:24 +03:00
Tim Head 46cd5670e8
Merge pull request #768 from davidanthoff/julia-1.2.0 
Add support for Julia 1.2.0
 2019-08-26 08:13:43 +02:00
David Anthoff 445bcb981c Add support for Julia 1.2.0 2019-08-25 21:46:23 -07:00
Tim Head 9c559d2a9d
Merge pull request #760 from AartGoossens/master 
Tiny typo in docs/source/index.rst
 2019-08-07 23:45:29 +02:00
Aart Goossens b4d48a853c
Tiny typo in docs/source/index.rst 2019-08-07 18:02:21 +02:00
Tim Head 69c09aeca2
Prepare release of 0.10.0 (#759) 
Prepare release of 0.10.0
 2019-08-07 09:25:47 +02:00
Tim Head 7e4b1bd34d Update Changelog 2019-08-07 09:19:55 +02:00
Tim Head d72c60182a
Merge pull request #728 from scottyhq/nopip 
[MRG] switch pip packages to conda-forge in conda buildpack
 2019-08-05 10:21:14 +02:00
Tim Head e012bb39fb
[MRG] Rewrite tests in test_semver.py #615 (#757) 
[MRG] Rewrite tests in test_semver.py #615
 2019-08-02 18:12:35 +02:00
Samnan Rahee 6efe82b9b7 rewrite /test/units/test_semver.py using @pytest.mark.parametrize fixes #615 2019-08-02 15:08:43 +06:00
Scott Henderson cfaa552cb4 node test for system package and conda-forge 2019-07-31 22:52:24 +00:00
Scott Henderson 5ea4c29b83 bump conda minor version to 4.7.10 and refreeze 2019-07-29 17:30:50 +00:00
Scott Henderson 955e422101 clarify application of environment.yml 2019-07-29 17:23:09 +00:00
Scott Henderson 62e10d6891 switched pip packages to conda-forge 2019-07-29 17:23:09 +00:00
Chris Holdgraf bf29f66f27
Merge pull request #752 from betatim/fix-preassemble-r-py-combo 
[MRG] Call parent preassemble scripts methods
 2019-07-23 13:15:52 -07:00
Tim Head e24e5d91ca Add test for R buildpack's get_preassemble_script_files 2019-07-23 18:23:30 +02:00
Tim Head 01c785f6fc Call parent preassemble scripts methods 
Without this we don't collect the files that other build packs need to
copy them over to the container in the pre-assemble stage.
 2019-07-23 07:33:06 +02:00
Tim Head 6c5c09b62b
Merge pull request #743 from minrk/conda-env-first-again-again 
[MRG] preassembly for conda/python
 2019-07-19 10:36:15 +02:00
Min RK 930e907ac6
Update repo2docker/buildpacks/conda/__init__.py 
Co-Authored-By: Tim Head <betatim@gmail.com>
 2019-07-19 08:56:06 +02:00
Tim Head 74af2ad83c
Merge pull request #748 from minrk/pipfile-toml 
parse pipfiles to determine Python version
 2019-07-18 21:48:35 +02:00
Tim Head 1774f8c68b
Merge pull request #746 from minrk/typo 
typo in doi regexp
 2019-07-18 21:38:57 +02:00
Min RK 31da8e32b1 run chown as root 2019-07-18 17:55:38 +02:00
Min RK 8236dc8ae1 only install pipenv in preassemble 
save preassembly of pipenv for a later patch
 2019-07-18 16:25:04 +02:00
Min RK 79c2617873 parse pipfiles to determine Python version 
these are structured files, no need to use regular expressions to parse them
 2019-07-18 16:13:41 +02:00
Min RK dd6cd93585 typo in doi regexp 
must use `r` prefix when there are escapes
 2019-07-18 14:41:01 +02:00
Min RK 009d09815a test local pip requirements 2019-07-18 14:40:17 +02:00
Min RK 654be046ac set permissions on repo_dir prior to preassemble 2019-07-18 14:40:08 +02:00
Min RK 3da5543bfc check for local pip requirements in conda environments 2019-07-18 14:39:35 +02:00
Tim Head 88eaa2305a
refreeze 2019-07-16 (#745) 
refreeze 2019-07-16
 2019-07-16 18:57:10 +02:00
Min RK 4f3f192d2f preassembly for pipfiles 2019-07-16 15:52:39 +02:00
Min RK d6e66c886d preassemble python 2019-07-16 15:52:39 +02:00
Min RK ddfd3f3464 refreeze 2019-07-16 2019-07-16 15:23:00 +02:00
Min RK 70878082f6 conda install occurs in preassemble 2019-07-16 09:02:35 +02:00
Min RK 5b12e072b1 move stencila to preassemble 2019-07-16 08:35:35 +02:00
Min RK b6ab2a9986 check requirements.txt for local references 
allows assemble_from_subset when requirements.txt doesn't contain any local references
 2019-07-16 07:56:11 +02:00
Min RK 5cf4f786e8 add assemble_subset 
- get_assemble_files() returns list of files needed for assembly
- if buildpack.assemble_with_subset is set, only load assemble_files
  prior to running assembly scripts. Load the rest of the repo afterward

conda opts in to this, but currently I think this works
for everything *except* requirements.txt
 2019-07-16 07:55:52 +02:00
Min RK 5ef42fc2af
Merge pull request #718 from betatim/early-r 
[MRG] Install R packages before copying repo contents
 2019-07-16 07:30:16 +02:00
David R. Pugh 399b339a4a [WIP] Version bump Conda from 4.6.14 to 4.7.5 (#719) 
Version bump conda to 4.7.5

Co-authored-by: pughdr <david.pugh@kaust.edu.sa>
 2019-07-12 18:50:11 +02:00
Tim Head 09b84811ae Make sure all loops over dict items are deterministic 2019-07-12 07:23:41 +02:00
Tim Head fbe3503320
Merge pull request #738 from eexwhyzee/add-bash-to-dockerfile 
[MRG] Adding bash to Dockerfile to fix git-credential-env
 2019-07-11 08:06:52 +02:00