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890 Commity
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890 Commity (a161b0925a3141e55db29b8d7928814ea33aa3c7)

Autor SHA1 Wiadomość Data
Chris Holdgraf a161b0925a
Merge pull request #428 from evertrol/adjust-css-header-links 
Adjust css for header links
 2018-10-10 07:31:43 -07:00
Evert Rol d7cee53419 Remove underlines from H2 headers that are links 
The `contents::` directive in Sphinx causes the headers of referred
sections to become links back to the line in the table of
contents. This causes the headers to use the default attributes for
links, including underlines. The latter makes the header style out of
line with the rest of the documentation. A single `text-decoration:
none` in the custom CSS file fixes this (note: only for H2 headers
currently: these were the offending ones).
 2018-10-10 14:51:10 +02:00
Evert Rol 3703750b8f Fix path to custom CSS file 
Note: Sphinx automatically already includes a _static/custom.css file,
so the change is not noticable; it only avoids a 404 for a single
file.
 2018-10-10 14:49:45 +02:00
Tim Head dc3114fdc0
Merge pull request #426 from evertrol/add-changelog 
Add a change log
 2018-10-10 10:33:16 +02:00
Evert Rol 3a99a5c56c Add a change log 
Adds an initial (template) change log, with a description on its usage
in the CONTRIBUTING documentation.
 2018-10-10 09:25:10 +02:00
Chris Holdgraf c0eaf5c8a7
Merge pull request #427 from betatim/update-contrib-docs 
[MRG] Update the contributing docs
 2018-10-09 11:37:07 -07:00
Tim Head 36c204d85b Update links to docs in the README 2018-10-09 10:12:56 +02:00
Tim Head d3c0aec374 Add a "checklist" for PRs to our contributing guide 2018-10-09 10:09:25 +02:00
Tim Head 53f0f78316
Merge pull request #425 from evertrol/change-faq-to-rst 
Change faq to rst
 2018-10-09 07:32:12 +02:00
Tim Head a0e4dff37f
Merge pull request #421 from evertrol/add-editable-mode 
Add an edit-mode option
 2018-10-08 19:50:11 +02:00
Evert Rol 0adfed437b Change FAQ format to reStructuredText 
- allows for admonition
- fixes reST/Sphinx directive used in Markdown
- removes dead link
 2018-10-08 15:38:24 +02:00
Evert Rol 754edd01c4 Move test fixture to conftest.py 2018-10-08 15:36:45 +02:00
Evert Rol 871b0629a4 Remove dockerfile/editable test from main tests 
The dockerfile test is used by test_editable, but should not be used
by the generated tests. Removing the verify script will prevent it
being run as part of the generated tests.
 2018-10-08 15:36:45 +02:00
Evert Rol c834e27686 Add test for host file creation in edit mode 
This will test whether an externally (host) created file is seen
inside the container. This means starting the container, creating a
temporary file on the host, then running a simple verification command
(`ls`) to detect the file. Once the temporary file is removed on the
host side, it should be removed in the container as well.
 2018-10-08 15:36:45 +02:00
Evert Rol 6847e71670 Add test for editable option 
This test only verifies the option one way: a change inside the
container (a new file) is reflected in the local host repository
outside the container.

A further test where a modification at the host level is reflected in
the container, is still neede.
 2018-10-08 15:36:45 +02:00
Evert Rol fd21926039 Add FAQ entry for editable local repositories 2018-10-05 14:08:51 +02:00
Evert Rol e9a31df758 Add an edit-mode option 
This adds an option to run from a local repository in edit mode, where
changes in a running Docker container (for example, through a
notebook) are reflected in the local repository.

Implements the feature suggested in #357
 2018-10-05 14:08:51 +02:00
Tim Head d95f7dc328
Merge pull request #420 from evertrol/clone-depth-1 
Speed up cloning by using a depth of 1 if there is no refspec
 2018-10-05 10:27:22 +02:00
Evert Rol 67cf0e6e8d Add test for clone depth 
Adds test for the use of a clone depth of 1 for cases where no refspec
is used. This relies on an external source (an existing test
repository), so may break easier.
 2018-10-05 09:36:32 +02:00
Tim Head 0278f12b39
Merge pull request #422 from evertrol/fix/documentation-avoid-clashing-markup 
Fix documentation: avoid clashing markup
 2018-10-03 15:37:11 +02:00
Evert Rol 38d95c0854 Change emphasis into a "note" admonition 2018-10-03 11:13:58 +02:00
Evert Rol 86c97d6e7b Remove erroneous backtick 2018-10-03 11:13:25 +02:00
Evert Rol 79a0608d52 Remove emphasis from a warning admonition 2018-10-03 11:12:00 +02:00
Evert Rol b9bab6e19d Avoid clashing inline markup 
Stops and starts emphasis around an inline code markup.

Also removes two emphasis sections, since these are at the start of
bullet points, creating emphasis already.
 2018-10-03 11:09:48 +02:00
Evert Rol fca93270c9 Speed up cloning by using a depth of 1 if there is no refspec 
To speed up cloning a repository, a shallow clone containing just the
last commit can be made, but *only* if no refspec is provided.
 2018-10-01 15:51:24 +02:00
Tim Head 32e5ef2a2b
Merge pull request #393 from NHDaly/julia_version_customization 
Julia v1.0 support: Add option to specify julia version in REQUIRE
 2018-10-01 14:59:01 +02:00
Nathan Daly 7fbb0f9964 Add JULIA_BINDDIR environment variable for julia v0.7+ 
Add tests for the ENVIRONMENT VARIABLES to the julia unit tests.
 2018-09-30 22:33:40 -04:00
Nathan Daly 55b84234f2 Update comments in README 2018-09-27 11:32:40 -04:00
Nathan Daly 8cb2b317d6 Remove accidental testing lines & HACK to fix `rm` 
Fixes the tests w/ hack: disabled `rm` installation file. Needs to
be fixed before submitting

Adds TODO for Project.toml support
 2018-09-27 11:00:42 -04:00
Tim Head 2ebc87b250
Merge pull request #405 from minrk/37 
Support python 3.7
 2018-09-27 10:35:10 +02:00
Tim Head 9956886e5c
Merge pull request #418 from gedankenstuecke/patch-1 
fix my heading mistake in the docs for DESCRIPTION files
 2018-09-27 07:06:33 +02:00
Bastian Greshake Tzovaras 677a083a20
Update config_files.rst 2018-09-26 23:25:58 +02:00
Bastian Greshake Tzovaras f76b36145f
fix my heading mistake in the docs for DESCRIPTION 2018-09-26 22:48:37 +02:00
Tim Head d2e69babf4
Merge pull request #406 from gedankenstuecke/add_r_description 
add R DESCRIPTION support
 2018-09-25 11:55:53 +02:00
Bastian Greshake Tzovaras 1662d7ea6e remove cruft in config_files work & simplify code 2018-09-25 10:53:46 +02:00
Bastian Greshake Tzovaras 9751c807fd Merge branch 'add_r_description' of github.com:gedankenstuecke/repo2docker into add_r_description 2018-09-23 22:18:14 +03:00
Bastian Greshake Tzovaras 1f5469feb5
use getwd() to find path instead of "." 2018-09-23 22:15:43 +03:00
Bastian Greshake Tzovaras 1519d3cfdf
Merge branch 'master' into add_r_description 2018-09-23 01:07:33 +03:00
Bastian Greshake Tzovaras 49b393e9a2
chmod x verify DESCRIPTION 2018-09-23 01:06:34 +03:00
Tim Head 79cb2ba240
Merge pull request #409 from choldgraf/docs_toc 
updating index, usage, and install docs
 2018-09-22 17:57:03 +02:00
Chris Holdgraf 8b29f316d2 updating per Tim comments and adding howto section 2018-09-21 19:01:53 -04:00
Bastian Greshake Tzovaras 834d74bbe1 build from DESCRIPTION w/o runtime.txt 2018-09-20 20:58:45 +03:00
Bastian Greshake Tzovaras 4a1b504dd2 add description test to this repo 2018-09-20 16:11:11 +03:00
Bastian Greshake Tzovaras cba81a73f8 allow DESCRIPTION to reside in binder subfolder 2018-09-19 11:08:38 +03:00
Chris Holdgraf 47c9f1d66c removing examples prototype 2018-09-18 14:38:50 -07:00
Bastian Greshake Tzovaras 56ca910a40 fix R DESCRIPTION installation 2018-09-18 16:10:12 +03:00
Min RK 74cb354baa add version support to faq 
includes outstanding PRs for Python, Julia
 2018-09-18 10:37:41 +02:00
Chris Holdgraf d6eea937ce updating index, usage, and install docs 2018-09-17 19:34:41 -04:00
Bastian Greshake Tzovaras e8593d6bdd first try for R DESCRIPTION 2018-09-17 13:18:33 +02:00
Min RK 46f056a4e2
Merge pull request #401 from betatim/fix-travis 
[MRG] Make travis fail when pytest fails
 2018-09-17 11:07:11 +02:00