OpenDroneMap-WebODM/app/api/formulas.py

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3.8 KiB
Python

# Algos from https://github.com/dirceup/tiled-vegetation-indices/blob/master/app/lib/vegetation_index.rb
# Functions can use all of the supported functions and operators from
# https://numexpr.readthedocs.io/en/latest/user_guide.html#supported-operators
import re
from functools import lru_cache
algos = {
'VARI': {
'expr': '(G - R) / (G + R - B)',
'help': 'Visual Atmospheric Resistance Index shows the areas of vegetation.'
},
'NDVI': {
'expr': '(N - R) / (N + R)',
'help': 'Normalized Difference Vegetation Index shows the amount of green vegetation.'
},
'BAI': {
'expr': '1.0 / (((0.1 - R) ** 2) + ((0.06 - N) ** 2))',
'help': 'Burn Area Index hightlights burned land in the red to near-infrared spectrum.'
},
'GLI': {
'expr': '((G * 2) - R - B) / ((G * 2) + R + B)',
'help': 'Green Leaf Index shows greens leaves and stems.'
},
'GNDVI':{
'expr': '(N - G) / (N + G)',
'help': 'Green Normalized Difference Vegetation Index is similar to NDVI, but measures the green spectrum instead of red.'
},
'GRVI':{
'expr': 'N / G',
'help': 'Green Ratio Vegetation Index is sensitive to photosynthetic rates in forests.'
},
'SAVI':{
'expr': '(1.5 * (N - R)) / (N + R + 0.5)',
'help': 'Soil Adjusted Vegetation Index is similar to NDVI but attempts to remove the effects of soil areas using an adjustment factor (0.5).'
},
'MNLI':{
'expr': '((N ** 2 - R) * 1.5) / (N ** 2 + R + 0.5)',
'help': 'Modified Non-Linear Index improves the Non-Linear Index algorithm to account for soil areas.'
},
'MSR': {
'expr': '((N / R) - 1) / (sqrt(N / R) + 1)',
'help': 'Modified Simple Ratio is an improvement of the Simple Ratio (SR) index to be more sensitive to vegetation.'
},
'RDVI': {
'expr': '(N - R) / sqrt(N + R)',
'help': 'Renormalized Difference Vegetation Index uses the difference between near-IR and red, plus NDVI to show areas of healthy vegetation.'
},
'TDVI': {
'expr': '1.5 * ((N - R) / sqrt(N ** 2 + R + 0.5))',
'help': 'Transformed Difference Vegetation Index highlights vegetation cover in urban environments.'
},
'OSAVI': {
'expr': '(N - R) / (N + R + 0.16)',
'help': 'Optimized Soil Adjusted Vegetation Index is based on SAVI, but tends to work better in areas with little vegetation where soil is visible.'
},
'LAI': {
'expr': '3.618 * (2.5 * (N - R) / (N + 6*R - 7.5*B + 1)) * 0.118',
'help': 'Leaf Area Index estimates foliage areas and predicts crop yields.'
},
'EVI': {
'expr': '2.5 * (N - R) / (N + 6*R - 7.5*B + 1)',
'help': 'Enhanced Vegetation Index is useful in areas where NDVI might saturate, by using blue wavelengths to correct soil signals.'
},
# more?
'_TESTRB': {
'expr': 'R + B'
},
'_TESTFUNC': {
'expr': 'R + (sqrt(B) )'
}
}
camera_filters = [
'RGB',
'NRG',
'NGB',
'RGN',
# more?
]
@lru_cache(maxsize=20)
def lookup_formula(algo, band_order = 'RGB'):
if algo is None:
return None
if band_order is None:
band_order = 'RGB'
if algo not in algos:
raise ValueError("Cannot find algorithm " + algo)
input_bands = tuple(band_order)
def repl(matches):
b = matches.group(1)
try:
return 'b' + str(input_bands.index(b) + 1)
except ValueError:
raise ValueError("Cannot find band \"" + b + "\" from \"" + band_order + "\". Choose a proper band order.")
return re.sub("([A-Z]+?[a-z]*)", repl, re.sub("\s+", "", algos[algo]['expr']))
def get_algorithm_list():
return [{'id': k, **algos[k]} for k in algos if not k.startswith("_")]
def get_camera_filters_list():
return camera_filters