Kyungdahm Yun
80837821ad
Catch errors on fetching Julia versions
2021-02-19 09:09:53 -08:00
Kyungdahm Yun
fc6ea2d53b
Fetch available Julia versions from versions.json
2021-02-19 09:08:03 -08:00
Min RK
b6e451dcda
Merge pull request #1019 from g-braeunlich/master
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buildpacks.r: dont use apt-key directly to respect *_proxy env vars
2021-02-19 09:40:09 +00:00
Gerhard Bräunlich
b66caf6f65
buildpacks.r: dont use apt-key directly to respect *_proxy env vars
2021-02-18 16:37:57 +01:00
Min RK
751ff6d4c3
bump docker action to v2
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- tags/repository are merged
- set context
2021-02-18 16:05:28 +01:00
Min RK
0f848f7855
handle $R2D_ENTRYPOINT in new entrypoint
2021-02-18 14:34:07 +01:00
Min RK
67cc5f7a75
bump notebook, nbconvert, jupyterhub
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- jupyterhub-singleuser==1.3.0
- nbconvert==6.0.7
- notebook==6.2.0
2021-02-18 14:25:47 +01:00
Min RK
5a32cc4ad8
refreeze with mamba, add 3.9 to freeze list
2021-02-18 14:25:47 +01:00
Min RK
f8d386a596
Merge pull request #996 from jtpio/lab-3
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Update to JupyterLab 3.0
2021-02-18 10:46:55 +00:00
Min RK
a06991de50
entrypoint needs to run on py35
2021-02-18 09:46:42 +01:00
Min RK
ebf640cb84
implement entrypoint in Python
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- make sure to set PYTHONUNBUFFERED
- implement tee with subprocess readlines
- forward all relevant signals from entrypoint to 'true' command
- add monitor process to ensure child shuts down if parent does (maybe not useful in docker?)
2021-02-17 16:13:42 +01:00
Yuvi Panda
f426891014
Merge pull request #960 from minrk/r4
2021-02-17 17:53:53 +05:30
Min RK
dce7984b37
Merge pull request #1003 from g-braeunlich/master
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Add entrypoint script which automatically propagates *_PROXY env vars…
2021-02-17 12:05:57 +00:00
Min RK
e862630ee1
Merge pull request #1008 from betatim/missing-logs
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Investigating the missing logs
2021-02-17 10:23:11 +00:00
Min RK
055f8d28b7
Merge pull request #1013 from minrk/circle-docs
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bump python in circleci test
2021-02-17 09:46:56 +00:00
Min RK
586d8d4269
bump python in docs tests
2021-02-16 16:22:51 +01:00
Jeremy Tuloup
4c061eebbb
Update to jupyter-offlinenotebook=0.2.1
2021-02-16 15:55:27 +01:00
Jeremy Tuloup
0ca6b4388a
Update to jupyterlab==3.0.7 and ipywidgets=7.6.3
2021-02-16 15:22:26 +01:00
Jeremy Tuloup
37c7f5a379
Update to jupyterlab==3.0.4
2021-02-16 14:54:38 +01:00
Jeremy Tuloup
e0432d37e7
Update to jupyter-offlinenotebook==0.2.0
2021-02-16 14:54:38 +01:00
Jeremy Tuloup
bd08989717
Add jupyter-offlinenotebook
2021-02-16 14:54:38 +01:00
Jeremy Tuloup
bcce6e8a1e
Update to JupyterLab 3.0
2021-02-16 14:54:38 +01:00
Min RK
8582d441eb
Merge pull request #1011 from MridulS/dataverse
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fix dataverse regression introduced in last release
2021-02-12 07:10:04 +00:00
Mridul Seth
0885204a5d
fix dataverse regression introduced in last release
2021-02-11 21:58:21 +01:00
Tim Head
6e372b5bc9
Extreme measures
2021-01-28 09:17:34 +01:00
Simon Li
cb4621f254
Merge pull request #987 from betatim/stream-logs
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[MRG] Stream jupyter server logs to a file
2021-01-27 17:08:17 +00:00
Tim Head
1140dd1919
Merge pull request #988 from douardda/swhid
2021-01-26 13:56:29 +01:00
Simon Li
ac41c201a3
Merge pull request #982 from betatim/codecov-for-gh-actions
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[MRG] Experiment with different install mechanism to get code coverage stats again
2021-01-25 18:55:17 +00:00
Chris Holdgraf
40f475f3c0
Merge pull request #1004 from betatim/setup-monthly-releases
2021-01-23 14:55:40 -08:00
Tim Head
3e6f99cefe
Fix/rewrite paths for codecov filename matching
2021-01-23 10:51:41 +01:00
Tim Head
da6e08aec0
Use Python codecov package instead of GH action
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We can't set the working directory of the GH Action which means we need
to install codecov ourselves and run it in the `tests/` sub-directory.
2021-01-23 10:51:41 +01:00
Tim Head
79325be491
Set working directory for codecov action
2021-01-23 10:51:41 +01:00
Tim Head
d56deb02dd
Changeg source file aliasing
2021-01-23 10:51:41 +01:00
Tim Head
b96412bd33
Specify coverage rule to combine results
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We can specify a rule to map different source files from which coverage
stats were collected to the same source file in our repository.
2021-01-23 10:51:41 +01:00
Tim Head
6145f463a8
Experiment with different install mechanism to get coverage
2021-01-23 10:51:41 +01:00
Tim Head
2c3e7dc57c
Run release workflow on push and pull_request
2021-01-23 10:25:52 +01:00
Tim Head
d5eaf445ce
Remove travis CI configuration
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All tests have been migrated to other CI providers so we can turn travis
off completely.
2021-01-23 10:23:13 +01:00
Tim Head
c7578d926e
Fix typo
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Co-authored-by: Chris Holdgraf <choldgraf@gmail.com>
2021-01-21 16:45:27 +01:00
Tim Head
edc5d20c54
Remove changelog reference
2021-01-20 15:29:05 +01:00
Tim Head
e048d5441e
Remove travis infrastructure for uploading releases to pypi.org
2021-01-20 15:29:05 +01:00
Tim Head
61a0f3d7d6
Update comment about travis steps
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We no longer run tests on the code so we would not spot missing files or
problems with the wheel we build.
2021-01-20 15:29:05 +01:00
Tim Head
98795a9e22
Add workflow to push a release to pypi
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This adds a new GH Action workflow that will build and upload a new
package to pypi.org. The release instructions are updated to use
calendar versioning. Outdated instructions related to the change log
have been removed.
2021-01-20 15:29:05 +01:00
Tim Head
45229ad613
Merge pull request #1001 from manics/fix_figshare_test
2021-01-20 11:20:13 +01:00
David Douard
5f26710d01
Mention the SWHID source-repository format in the usage documentation
2021-01-19 18:04:48 +01:00
David Douard
e54c24ce2e
Add support for the SWHID content provider
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This content provider allows to retrieve the content from a
Software Heritage (SWH) persistent identifier (SWHID).
Typical usage:
repo2docker swh:1:rev:94dca98c006b80309704c717b5d83dff3c1fa3a0
It uses the SWH public vault API to retrieve the content of the given
directory.
Most of the times, this will not need an authentication
token to bypass the rate-limiting of the SWH API.
Without authentication, one should be allowed to retrieve one
directory content per minute.
If this is not enought, then the user must use authenticated calls to
the SWH API.
For this, a new `swh_token` config item has been added to the Repo2Docker
application class.
To use authentication:
repo2docker --config cfg.json swh:1:rev:94dca98c006b80309704c717b5d83dff3c1fa3a0
with the swh_token config option being defined in the cfg.json config file.
2021-01-19 18:04:46 +01:00
David Douard
983607fed7
Fix the docker image name generation
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make sure all the parts that constitute the generated docker image name
are escaped, otherwise the docker building process can fail (with a rather
hard to understand error).
Before this fix, the `provider.content_id` was not escaped.
2021-01-19 18:03:50 +01:00
Tim Head
a0606f2b57
Merge pull request #993 from douardda/requests
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Replace urllib by requests in contentproviders
2021-01-19 17:51:00 +01:00
David Douard
830a9c89c0
Replace urllib by requests in contentproviders
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requests is globally simpler to use, and more and more people
are more familiar with this later than urllib.
2021-01-18 17:29:53 +01:00
Tim Head
c75b5ab72a
Merge pull request #990 from FRidh/nix
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buildpacks/nix: disable sandboxing (bugfix)
2021-01-17 10:00:20 +01:00
Simon Li
ee7f7790d3
figshare article types: code and dataset
2021-01-15 16:11:27 +00:00