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1 849 Commity
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22 Tagi
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1849 Commity (2f08ab7bdbdcedfc1557e9fc2429215acaaffbcc)

Autor SHA1 Wiadomość Data
Min RK 28941f7900 add hooks to dockerignore 
will hopefully fix dirty flag on docker hub
 2019-09-07 13:57:47 +02:00
Min RK 088cf6e308 let black have its way 2019-09-07 13:34:07 +02:00
Tim Head 0b839428cc Use new way of installing bioconductor 2019-09-07 13:30:46 +02:00
Min RK 4f428c3055
Merge pull request #681 from Xarthisius/abspath_in_scripts 
[MRG] Allow absolute paths in build_script_files. Fixes #673
 2019-09-07 12:33:14 +02:00
Daniel Nüst b3f82db558 exit and show clean error message (no log) if docker connection fails 2019-09-07 12:16:41 +02:00
Min RK 2871c07cc0
Merge branch 'master' into help 2019-09-07 12:16:23 +02:00
Tim Head 37774fc288
Merge pull request #727 from minrk/full-progress 
include full docker progress events in push progress events
 2019-09-07 11:45:32 +02:00
Tim Head 82cd28dbe7
include repo2docker version in docker tags (#777) 
include repo2docker version in docker tags
 2019-09-07 11:24:05 +02:00
Daniel Nüst c8cd3269c0 add explicit log message on failing Docker connection, see #774 2019-09-07 09:22:00 +02:00
Tim Head e0b1d474bd Add translation from short versions to long versions 2019-09-06 22:12:46 +02:00
Min RK 3cc3aa4968 use repo2docker version in docker tags 
docker tags will include versioneer tag, e.g. `0.10.0-4.abc123` where

- 0.10.0 is the latest tag
- 4 is the number of commits since then
- abc123 is the current commit hash
 2019-09-06 12:31:35 +02:00
Min RK 0e2349fdec avoid dirty in repo2docker version in docker image 
by calling git clean
 2019-09-06 12:26:56 +02:00
Tim Head 4be9fe0731 SUpport R runtime strings that don't specify a version 2019-09-06 12:12:06 +02:00
Tim Head ef9d27ac2c Add support for innstalling different versions of R 2019-09-03 07:20:38 +02:00
Tim Head b20eb6a84b
Merge pull request #771 from GeorgianaElena/fix_requirements_possible_encodings 
Handle different file encodings
 2019-08-30 17:09:38 +02:00
GeorgianaElena 75f4a70fec Black refactor 2019-08-30 11:26:48 +03:00
GeorgianaElena 5e4932b704 Added test for open_guess_encoding 2019-08-30 11:06:53 +03:00
GeorgianaElena 795769ee28 Removed debug print 2019-08-29 15:51:12 +03:00
GeorgianaElena 95fd0e5b81 Don't change file encoding 2019-08-29 15:13:33 +03:00
GeorgianaElena 3752fa1868 Added function to handle different file encodings 2019-08-28 16:25:12 +03:00
Tim Head 96cfc504ff
Merge pull request #770 from GeorgianaElena/upgrade_IRKernel 
[WIP] Upgrade IRKernel version to 1.0.2
 2019-08-26 18:38:43 +02:00
GeorgianaElena 5983ded5bb Upgrade IRKernel version to 1.0.2 2019-08-26 17:53:53 +03:00
Min RK 59795ecbda
Merge pull request #769 from kaust-vislab/miniconda-version-bump 
Bump Miniconda from 4.6.14 to 4.7.10
 2019-08-26 12:54:48 +02:00
pughdr 6de9bd4c69 Fixed merge conflict 2019-08-26 12:50:24 +03:00
Tim Head 46cd5670e8
Merge pull request #768 from davidanthoff/julia-1.2.0 
Add support for Julia 1.2.0
 2019-08-26 08:13:43 +02:00
David Anthoff 445bcb981c Add support for Julia 1.2.0 2019-08-25 21:46:23 -07:00
Scott Black ebbc9e0233 update messaging 2019-08-23 11:16:39 -06:00
Scott Black b068f8d9c1 extend wait time and cleanup messaging 2019-08-23 11:09:26 -06:00
Scott Black 970c7ece20 actually reconnect 2019-08-23 11:06:02 -06:00
Scott Black 97eee3b8c0 allow for bag creation 2019-08-23 10:56:52 -06:00
Scott Black 8817fec7ac handle traliing slash in url 2019-08-22 17:24:52 -06:00
Scott Black 9927faaafd extract from contents directory 2019-08-22 17:10:55 -06:00
Scott Black fdb92525c6 only use data/contents directory 2019-08-22 17:00:55 -06:00
Scott Black 316b1a0f34 use request.urlretrieve 2019-08-22 16:41:31 -06:00
Scott Black fc9326cbf3 add hydroshare as a content provider 2019-08-22 16:39:42 -06:00
Scott Black e04bc18248 remove unused imports 2019-08-22 16:33:25 -06:00
Scott Black 5f574d3a2c initial checkin of hydroshare content provider 2019-08-22 16:30:48 -06:00
Tim Head 9c559d2a9d
Merge pull request #760 from AartGoossens/master 
Tiny typo in docs/source/index.rst
 2019-08-07 23:45:29 +02:00
Aart Goossens b4d48a853c
Tiny typo in docs/source/index.rst 2019-08-07 18:02:21 +02:00
Tim Head 69c09aeca2
Prepare release of 0.10.0 (#759) 
Prepare release of 0.10.0
 2019-08-07 09:25:47 +02:00
Tim Head 7e4b1bd34d Update Changelog 2019-08-07 09:19:55 +02:00
Tim Head d72c60182a
Merge pull request #728 from scottyhq/nopip 
[MRG] switch pip packages to conda-forge in conda buildpack
 2019-08-05 10:21:14 +02:00
Tim Head e012bb39fb
[MRG] Rewrite tests in test_semver.py #615 (#757) 
[MRG] Rewrite tests in test_semver.py #615
 2019-08-02 18:12:35 +02:00
Samnan Rahee 6efe82b9b7 rewrite /test/units/test_semver.py using @pytest.mark.parametrize fixes #615 2019-08-02 15:08:43 +06:00
Scott Henderson cfaa552cb4 node test for system package and conda-forge 2019-07-31 22:52:24 +00:00
Scott Henderson 5ea4c29b83 bump conda minor version to 4.7.10 and refreeze 2019-07-29 17:30:50 +00:00
Scott Henderson 955e422101 clarify application of environment.yml 2019-07-29 17:23:09 +00:00
Scott Henderson 62e10d6891 switched pip packages to conda-forge 2019-07-29 17:23:09 +00:00
Chris Holdgraf bf29f66f27
Merge pull request #752 from betatim/fix-preassemble-r-py-combo 
[MRG] Call parent preassemble scripts methods
 2019-07-23 13:15:52 -07:00
Tim Head e24e5d91ca Add test for R buildpack's get_preassemble_script_files 2019-07-23 18:23:30 +02:00