diff --git a/repo2docker/app.py b/repo2docker/app.py
index 7f658852..9cba759c 100644
--- a/repo2docker/app.py
+++ b/repo2docker/app.py
@@ -30,7 +30,7 @@ from . import __version__
from .buildpacks import (
PythonBuildPack, DockerBuildPack, LegacyBinderDockerBuildPack,
CondaBuildPack, JuliaBuildPack, BaseImage,
- RBuildPack
+ RBuildPack, StencilaBuildPack,
)
from .utils import (
execute_cmd, ByteSpecification, maybe_cleanup, is_valid_docker_image_name,
@@ -67,6 +67,7 @@ class Repo2Docker(Application):
DockerBuildPack,
JuliaBuildPack,
RBuildPack,
+ StencilaBuildPack,
CondaBuildPack,
PythonBuildPack,
],
diff --git a/repo2docker/buildpacks/__init__.py b/repo2docker/buildpacks/__init__.py
index 5ccc0c0e..93efe124 100644
--- a/repo2docker/buildpacks/__init__.py
+++ b/repo2docker/buildpacks/__init__.py
@@ -5,3 +5,4 @@ from .julia import JuliaBuildPack
from .docker import DockerBuildPack
from .legacy import LegacyBinderDockerBuildPack
from .r import RBuildPack
+from .stencila import StencilaBuildPack
diff --git a/repo2docker/buildpacks/stencila/__init__.py b/repo2docker/buildpacks/stencila/__init__.py
new file mode 100644
index 00000000..8c0c0963
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/__init__.py
@@ -0,0 +1 @@
+from .stencila import *
diff --git a/repo2docker/buildpacks/stencila/index.html b/repo2docker/buildpacks/stencila/index.html
new file mode 100644
index 00000000..6fc52d5d
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/index.html
@@ -0,0 +1,25 @@
+
+
+
+
+ Stencila Project
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/repo2docker/buildpacks/stencila/jupyter_notebook_config.py b/repo2docker/buildpacks/stencila/jupyter_notebook_config.py
new file mode 100644
index 00000000..ee8581ea
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/jupyter_notebook_config.py
@@ -0,0 +1,71 @@
+import pipes
+import sys
+
+from nbserverproxy.handlers import SuperviseAndProxyHandler
+
+# define our proxy handler for proxying the application
+
+class StencilaProxyHandler(SuperviseAndProxyHandler):
+
+ name = 'stencila'
+
+ def get_env(self):
+ return {
+ 'STENCILA_PORT': str(self.port),
+ 'STENCILA_ARCHIVE_DIR': self.state['notebook_dir'],
+ 'BASE_URL': self.state['base_url'],
+ }
+
+ def get_cmd(self):
+ return [
+ 'sh', '-c', 'cd "$STENCILA_DIR"; node stencila.js',
+ ]
+
+
+class StencilaHostProxyHandler(SuperviseAndProxyHandler):
+
+ name = 'stencila-host'
+
+ def get_env(self):
+ return {
+ 'STENCILA_HOST_PORT': str(self.port)
+ }
+
+ def get_cmd(self):
+ return [
+ 'sh', '-c', 'cd "$STENCILA_DIR"; node stencila-host.js',
+ ]
+
+
+def add_handlers(app):
+ """Register the stencila proxy directory"""
+ app.log.info("serving stencila at %s", app.base_url + 'stencila')
+ app.web_app.add_handlers('.*', [
+ (
+ app.base_url + 'stencila/(.*)',
+ StencilaProxyHandler,
+ dict(state=dict(
+ base_url=app.base_url,
+ notebook_dir=app.notebook_dir,
+ )),
+
+ ), (
+ app.base_url + 'stencila-host/(.*)',
+ StencilaHostProxyHandler,
+ dict(state=dict(
+ base_url=app.base_url,
+ notebook_dir=app.notebook_dir,
+ )),
+ ),
+ ])
+
+
+# fake a module to load the proxy handler as an extension
+module_name = '_stencilaproxy'
+import types
+mod = types.ModuleType(module_name)
+sys.modules[module_name] = mod
+mod.load_jupyter_server_extension = add_handlers
+c.NotebookApp.nbserver_extensions.update({
+ module_name: True,
+})
diff --git a/repo2docker/buildpacks/stencila/package-lock.json b/repo2docker/buildpacks/stencila/package-lock.json
new file mode 100644
index 00000000..16f11e23
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/package-lock.json
@@ -0,0 +1,6345 @@
+{
+ "name": "jupyter-dar",
+ "version": "0.0.1",
+ "lockfileVersion": 1,
+ "requires": true,
+ "dependencies": {
+ "3d-view": {
+ "version": "2.0.0",
+ "resolved": "https://registry.npmjs.org/3d-view/-/3d-view-2.0.0.tgz",
+ "integrity": "sha1-gxrpQtdQjFCAHj4G+v4ejFdOF74=",
+ "requires": {
+ "matrix-camera-controller": "2.1.3",
+ "orbit-camera-controller": "4.0.0",
+ "turntable-camera-controller": "3.0.1"
+ }
+ },
+ "3d-view-controls": {
+ "version": "2.2.2",
+ "resolved": "https://registry.npmjs.org/3d-view-controls/-/3d-view-controls-2.2.2.tgz",
+ "integrity": "sha512-WL0u3PN41lEx/4qvKqV6bJlweUYoW18FXMshW/qHb41AVdZxDReLoJNGYsI7x6jf9bYelEF62BJPQmO7yEnG2w==",
+ "requires": {
+ "3d-view": "2.0.0",
+ "has-passive-events": "1.0.0",
+ "mouse-change": "1.4.0",
+ "mouse-event-offset": "3.0.2",
+ "mouse-wheel": "1.2.0",
+ "right-now": "1.0.0"
+ }
+ },
+ "@mapbox/geojson-area": {
+ "version": "0.2.2",
+ "resolved": "https://registry.npmjs.org/@mapbox/geojson-area/-/geojson-area-0.2.2.tgz",
+ "integrity": "sha1-GNeBSqNr8j+7zDefjiaiKSfevxA=",
+ "requires": {
+ "wgs84": "0.0.0"
+ }
+ },
+ "@mapbox/gl-matrix": {
+ "version": "0.0.1",
+ "resolved": "https://registry.npmjs.org/@mapbox/gl-matrix/-/gl-matrix-0.0.1.tgz",
+ "integrity": "sha1-5RJqq01kw2uBx6l9CuDd3eV3PSs="
+ },
+ "@mapbox/mapbox-gl-supported": {
+ "version": "1.3.1",
+ "resolved": "https://registry.npmjs.org/@mapbox/mapbox-gl-supported/-/mapbox-gl-supported-1.3.1.tgz",
+ "integrity": "sha512-tMdtbKjxVaA3WZubFTKIPjAHKNz8PCqUGdRgT7RIpqLHLxZi3eQWzixrnyYA5dglEnbfcIEPvtRQu/4yXPt2YQ=="
+ },
+ "@mapbox/point-geometry": {
+ "version": "0.1.0",
+ "resolved": "https://registry.npmjs.org/@mapbox/point-geometry/-/point-geometry-0.1.0.tgz",
+ "integrity": "sha1-ioP5M1x4YO/6Lu7KJUMyqgru2PI="
+ },
+ "@mapbox/shelf-pack": {
+ "version": "3.1.0",
+ "resolved": "https://registry.npmjs.org/@mapbox/shelf-pack/-/shelf-pack-3.1.0.tgz",
+ "integrity": "sha1-Ht6pwL9nFbIXFxumBkbCAa9SD2o="
+ },
+ "@mapbox/tiny-sdf": {
+ "version": "1.1.0",
+ "resolved": "https://registry.npmjs.org/@mapbox/tiny-sdf/-/tiny-sdf-1.1.0.tgz",
+ "integrity": "sha512-dnhyk8X2BkDRWImgHILYAGgo+kuciNYX30CUKj/Qd5eNjh54OWM/mdOS/PWsPeN+3abtN+QDGYM4G220ynVJKA=="
+ },
+ "@mapbox/unitbezier": {
+ "version": "0.0.0",
+ "resolved": "https://registry.npmjs.org/@mapbox/unitbezier/-/unitbezier-0.0.0.tgz",
+ "integrity": "sha1-FWUb1VOme4WB+zmIEMmK2Go0Uk4="
+ },
+ "@mapbox/vector-tile": {
+ "version": "1.3.1",
+ "resolved": "https://registry.npmjs.org/@mapbox/vector-tile/-/vector-tile-1.3.1.tgz",
+ "integrity": "sha512-MCEddb8u44/xfQ3oD+Srl/tNcQoqTw3goGk2oLsrFxOTc3dUp+kAnby3PvAeeBYSMSjSPD1nd1AJA6W49WnoUw==",
+ "requires": {
+ "@mapbox/point-geometry": "0.1.0"
+ }
+ },
+ "@mapbox/whoots-js": {
+ "version": "3.0.0",
+ "resolved": "https://registry.npmjs.org/@mapbox/whoots-js/-/whoots-js-3.0.0.tgz",
+ "integrity": "sha1-wd5CkwgUJNo6wwwjr6hQrxAZu1Q="
+ },
+ "@plotly/d3-sankey": {
+ "version": "0.5.0",
+ "resolved": "https://registry.npmjs.org/@plotly/d3-sankey/-/d3-sankey-0.5.0.tgz",
+ "integrity": "sha1-si+up0LlglEzXuXZ+6JIdyYHgA8=",
+ "requires": {
+ "d3-array": "1.2.1",
+ "d3-collection": "1.0.4",
+ "d3-interpolate": "1.2.0"
+ }
+ },
+ "@stdlib/stdlib": {
+ "version": "0.0.36",
+ "resolved": "https://registry.npmjs.org/@stdlib/stdlib/-/stdlib-0.0.36.tgz",
+ "integrity": "sha512-sHo1l2Z3IBeZ47YUfQSpJBU3lbHX9ut0U9xN/MO8XUi3rRQUl/lH9WIRfJldESYt8ONkiHpMsYzoM8dCSrUO/w==",
+ "requires": {
+ "d3-format": "1.3.0",
+ "d3-scale": "1.0.7",
+ "d3-shape": "1.2.0",
+ "d3-time-format": "2.1.1",
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+ "integrity": "sha1-u5NdSFgsuhaMBoNJV6VKPgcSTxE="
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+ "requires": {
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+ "inherits": "2.0.3",
+ "isarray": "1.0.0",
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+ }
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+ "version": "2.0.49",
+ "resolved": "https://registry.npmjs.org/@types/jquery/-/jquery-2.0.49.tgz",
+ "integrity": "sha512-/9xLnYmohN/vD2gDnLS4cym8TUmrJu7DvZa/LELKzZjdPsvWVJiedsdu2SXNtb/DA7FGimqL2g0IoyhbNKLl8g=="
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+ "resolved": "https://registry.npmjs.org/JSV/-/JSV-4.0.2.tgz",
+ "integrity": "sha1-0Hf2glVx+CEy+d/67Vh7QCn+/1c="
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diff --git a/repo2docker/buildpacks/stencila/package.json b/repo2docker/buildpacks/stencila/package.json
new file mode 100644
index 00000000..718145fe
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/package.json
@@ -0,0 +1,30 @@
+{
+ "name": "jupyter-dar",
+ "version": "0.0.1",
+ "description": "javascript dependencies for jupyter-dar",
+ "main": "stencila.js",
+ "dependencies": {
+ "stencila": "0.28.1-preview.2",
+ "stencila-node": "stencila/node#9b619f8f191474dc362934993199642acdf81ae2"
+ },
+ "devDependencies": {},
+ "scripts": {
+ "test": "echo \"Error: no test specified\" && exit 1"
+ },
+ "repository": {
+ "type": "git",
+ "url": "git+https://github.com/minrk/jupyter-dar.git"
+ },
+ "keywords": [
+ "jupyter",
+ "dar",
+ "stencila",
+ "texture"
+ ],
+ "author": "Min RK, Daniel Nüst",
+ "license": "BSD-3-Clause",
+ "bugs": {
+ "url": "https://github.com/minrk/jupyter-dar/issues"
+ },
+ "homepage": "https://github.com/minrk/jupyter-dar#readme"
+}
diff --git a/repo2docker/buildpacks/stencila/stencila-ext.json b/repo2docker/buildpacks/stencila/stencila-ext.json
new file mode 100644
index 00000000..4b7ae9cc
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/stencila-ext.json
@@ -0,0 +1,7 @@
+{
+ "NotebookApp": {
+ "nbserver_extensions": {
+ "_stencilaproxy": true
+ }
+ }
+}
diff --git a/repo2docker/buildpacks/stencila/stencila-host.js b/repo2docker/buildpacks/stencila/stencila-host.js
new file mode 100644
index 00000000..4ef9e5f9
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/stencila-host.js
@@ -0,0 +1,10 @@
+const stencila = require("stencila-node");
+
+// Get the port passed here from the `nbserverproxy.hanglers.SuperviseAndProxyHandler`
+const port = parseInt(process.env.STENCILA_HOST_PORT || '2000')
+
+// Run the Stencila execution host without
+// any authentication (handled by Jupyter)
+process.env.STENCILA_AUTH = 'false'
+
+stencila.run({ port })
diff --git a/repo2docker/buildpacks/stencila/stencila.js b/repo2docker/buildpacks/stencila/stencila.js
new file mode 100644
index 00000000..04c22769
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/stencila.js
@@ -0,0 +1,26 @@
+const path = require("path");
+const darServer = require("dar-server");
+const express = require("express");
+
+const port = parseInt(process.env.STENCILA_PORT || '4000');
+const archiveDir = process.env.STENCILA_ARCHIVE_DIR || process.env.HOME;
+const baseUrl = process.env.BASE_URL || "/";
+const serverUrl = baseUrl + "stencila";
+const server = express();
+
+darServer.serve(server, {
+ port: port,
+ serverUrl: serverUrl,
+ rootDir: archiveDir,
+ apiUrl: "/archives"
+});
+
+var staticDir = __dirname;
+
+console.log("Stencila app root: %s", staticDir);
+console.log("DAR archive path: %s", archiveDir);
+console.log("DAR public URL: %s", serverUrl);
+console.log("Serving stencila on :%s", port);
+
+server.use("/", express.static(staticDir));
+server.listen(port);
diff --git a/repo2docker/buildpacks/stencila/stencila.py b/repo2docker/buildpacks/stencila/stencila.py
new file mode 100644
index 00000000..2706da02
--- /dev/null
+++ b/repo2docker/buildpacks/stencila/stencila.py
@@ -0,0 +1,120 @@
+"""
+Buildpack for stencila editor for DAR document archives
+"""
+
+import re
+import os
+import datetime
+
+from ..conda import CondaBuildPack
+
+
+class StencilaBuildPack(CondaBuildPack):
+ """Stencila buildpack
+
+ - installs stencila in /opt/stencila
+ - installs nbserverproxy
+ - registers nbserverproxy extension for stencila
+ """
+
+ @property
+ def runtime(self):
+ """
+ Return contents of runtime.txt if it exists, '' otherwise
+ """
+ if not hasattr(self, "_runtime"):
+ runtime_path = self.binder_path("runtime.txt")
+ try:
+ with open(runtime_path) as f:
+ self._runtime = f.read().strip()
+ except FileNotFoundError:
+ self._runtime = ""
+
+ return self._runtime
+
+ def detect(self):
+ """
+ Check if current repo should be built with the stencila
+
+ Currently only checks for 'stencila' in runtime.txt
+ """
+ return self.runtime.startswith("stencila")
+
+ def get_env(self):
+ """
+ Return environment variables to be set.
+
+ Sets STENCILA_DIR
+ """
+ return super().get_env() + [
+ # This is the path where user libraries are installed
+ ("STENCILA_DIR", "/opt/stencila")
+ ]
+
+ def get_build_script_files(self):
+ """
+ Dict of files to be copied to the container image for use in building.
+
+ This is copied before the `build_scripts` & `assemble_scripts` are
+ run, so can be executed from either of them.
+
+ It's a dictionary where the key is the source file path in the host
+ system, and the value is the destination file path inside the
+ container image.
+
+ Includes files required for running stencila
+
+ This currently adds a frozen set of Python requirements to the dict
+ of files.
+
+ """
+ files = super().get_build_script_files()
+ for f in [
+ "index.html",
+ "stencila.js",
+ "stencila-host.js",
+ "package.json",
+ "package-lock.json",
+ ]:
+ files["stencila/" + f] = "${STENCILA_DIR}/" + f
+ files[
+ "stencila/jupyter_notebook_config.py"
+ ] = "/etc/jupyter/jupyter_notebook_config.py"
+ files[
+ "stencila/stencila-ext.json"
+ ] = "/etc/jupyter/jupyter_notebook_config.d/stencila-ext.json"
+ return files
+
+ def get_build_scripts(self):
+ """
+ Install commands for stencila
+ """
+ return super().get_build_scripts() + [
+ (
+ "root",
+ r"""
+ mkdir -p ${STENCILA_DIR} && \
+ chown -R ${NB_USER}:${NB_USER} ${STENCILA_DIR}
+ """,
+ ),
+ (
+ "${NB_USER}",
+ # install nbserverproxy
+ r"""
+ pip install https://github.com/minrk/nbserverproxy/archive/del-starting.tar.gz
+ """,
+ ),
+ (
+ "${NB_USER}",
+ # install stencila
+ r"""
+ cd ${STENCILA_DIR} && \
+ npm install
+ """,
+ ),
+ ]
+
+ def get_assemble_scripts(self):
+ """Return assembly scripts to run after staging repo contents"""
+ assemble_scripts = super().get_assemble_scripts()
+ return assemble_scripts