kopia lustrzana https://github.com/jupyterhub/repo2docker
commit
2ebc87b250
|
@ -3,10 +3,45 @@
|
|||
A collection of frequently asked questions with answers. If you have a question
|
||||
and have found an answer, send a PR to add it here!
|
||||
|
||||
## How should I specify another version of Python 3?
|
||||
## How should I specify another version of Python?
|
||||
|
||||
One can specify a Python version in the ``environment.yml`` file of a repository.
|
||||
|
||||
## What versions of Python (or R or Julia...) are supported?
|
||||
|
||||
### Python
|
||||
|
||||
Repo2docker officially supports the following versions of Python (specified in environment.yml or runtime.txt):
|
||||
|
||||
- 3.7 (added in 0.7)
|
||||
- 3.6 (default)
|
||||
- 3.5
|
||||
|
||||
Additional versions may work, as long as the
|
||||
[base environment](https://github.com/jupyter/repo2docker/blob/master/repo2docker/buildpacks/conda/environment.yml)
|
||||
can be installed for your version of Python.
|
||||
The most likely source of incompatibility is if one of the packages
|
||||
in the base environment is not packaged for your Python,
|
||||
either because the version of the package is too new and your chosen Python is too old,
|
||||
or vice versa.
|
||||
|
||||
Additionally, if Python 2.7 is specified,
|
||||
a separate environment for the kernel will be installed with Python 2.
|
||||
The notebook server will run in the default Python 3.6 environment.
|
||||
|
||||
### Julia
|
||||
|
||||
The following versions of Julia are supported (specified in REQUIRE):
|
||||
|
||||
- 1.0 (added in 0.7)
|
||||
- 0.7 (added in 0.7)
|
||||
- 0.6 (default)
|
||||
|
||||
### R
|
||||
|
||||
Only R 3.4.4 is currently supported, which is installed via `apt` from the
|
||||
[ubuntu bionic repository](https://packages.ubuntu.com/bionic/r-base).
|
||||
|
||||
## Can I add executable files to the user's PATH?
|
||||
|
||||
Yes! With a :ref:`postBuild` file, you can place any files that should be called
|
||||
|
|
|
@ -1,32 +1,21 @@
|
|||
# AUTO GENERATED FROM environment.py-3.6.yml, DO NOT MANUALLY MODIFY
|
||||
# Frozen on 2018-09-07 17:44:07 UTC
|
||||
# Frozen on 2018-09-17 08:36:41 UTC
|
||||
name: r2d
|
||||
channels:
|
||||
- conda-forge
|
||||
- defaults
|
||||
- conda-forge/label/broken
|
||||
dependencies:
|
||||
- appdirs=1.4.3=py_1
|
||||
- asn1crypto=0.24.0=py36_3
|
||||
- attrs=18.2.0=py_0
|
||||
- automat=0.7.0=py_1
|
||||
- backcall=0.1.0=py_0
|
||||
- bleach=2.1.4=py_1
|
||||
- bzip2=1.0.6=h470a237_2
|
||||
- ca-certificates=2018.8.24=ha4d7672_0
|
||||
- certifi=2018.8.24=py36_1
|
||||
- cffi=1.11.5=py36h5e8e0c9_1
|
||||
- constantly=15.1.0=py_0
|
||||
- cryptography=2.3.1=py36hdffb7b8_0
|
||||
- cryptography-vectors=2.3.1=py36_0
|
||||
- decorator=4.3.0=py_0
|
||||
- defusedxml=0.5.0=py36_0
|
||||
- entrypoints=0.2.3=py36_2
|
||||
- gmp=6.1.2=hfc679d8_0
|
||||
- html5lib=1.0.1=py_0
|
||||
- hyperlink=17.3.1=py_0
|
||||
- idna=2.7=py36_2
|
||||
- incremental=17.5.0=py_0
|
||||
- ipykernel=4.9.0=py36_0
|
||||
- ipython=6.5.0=py36_0
|
||||
- ipython_genutils=0.2.0=py_1
|
||||
|
@ -36,7 +25,7 @@ dependencies:
|
|||
- jsonschema=2.6.0=py36_2
|
||||
- jupyter_client=5.2.3=py_1
|
||||
- jupyter_core=4.4.0=py_0
|
||||
- jupyterlab=0.34.0=py36_0
|
||||
- jupyterlab=0.34.9=py36_0
|
||||
- jupyterlab_launcher=0.13.1=py_2
|
||||
- libffi=3.2.1=hfc679d8_5
|
||||
- libgcc-ng=7.2.0=hdf63c60_3
|
||||
|
@ -44,32 +33,26 @@ dependencies:
|
|||
- libstdcxx-ng=7.2.0=hdf63c60_3
|
||||
- markupsafe=1.0=py36h470a237_1
|
||||
- mistune=0.8.3=py36h470a237_2
|
||||
- nbconvert=5.4.0=0
|
||||
- nbconvert=5.4.0=1
|
||||
- nbformat=4.4.0=py_1
|
||||
- ncurses=6.1=hfc679d8_1
|
||||
- notebook=5.6.0=py36_1
|
||||
- openssl=1.0.2p=h470a237_0
|
||||
- pandoc=2.2.2=1
|
||||
- pandoc=1.19.2=0
|
||||
- pandocfilters=1.4.2=py_1
|
||||
- parso=0.3.1=py_0
|
||||
- pexpect=4.6.0=py36_0
|
||||
- pickleshare=0.7.4=py36_0
|
||||
- pip=18.0=py36_1
|
||||
- prometheus_client=0.3.0=py_0
|
||||
- prometheus_client=0.3.1=py_1
|
||||
- prompt_toolkit=1.0.15=py_1
|
||||
- ptyprocess=0.6.0=py36_0
|
||||
- pyasn1=0.4.4=py_0
|
||||
- pyasn1-modules=0.2.1=py_0
|
||||
- pycparser=2.18=py_1
|
||||
- pygments=2.2.0=py_1
|
||||
- pyhamcrest=1.9.0=py_2
|
||||
- pyopenssl=18.0.0=py36_0
|
||||
- python=3.6.6=h5001a0f_0
|
||||
- python-dateutil=2.7.3=py_0
|
||||
- pyzmq=17.1.2=py36hae99301_0
|
||||
- readline=7.0=haf1bffa_1
|
||||
- send2trash=1.5.0=py_0
|
||||
- service_identity=17.0.0=py_0
|
||||
- setuptools=40.2.0=py36_0
|
||||
- simplegeneric=0.8.1=py_1
|
||||
- six=1.11.0=py36_1
|
||||
|
@ -79,7 +62,6 @@ dependencies:
|
|||
- tk=8.6.8=0
|
||||
- tornado=4.5.3=py36_0
|
||||
- traitlets=4.3.2=py36_0
|
||||
- twisted=18.7.0=py36h470a237_1
|
||||
- wcwidth=0.1.7=py_1
|
||||
- webencodings=0.5.1=py_1
|
||||
- wheel=0.31.1=py36_1
|
||||
|
@ -87,7 +69,6 @@ dependencies:
|
|||
- xz=5.2.4=h470a237_1
|
||||
- zeromq=4.2.5=hfc679d8_5
|
||||
- zlib=1.2.11=h470a237_3
|
||||
- zope.interface=4.5.0=py36h470a237_1
|
||||
- pip:
|
||||
- nteract-on-jupyter==1.9.6
|
||||
prefix: /opt/conda/envs/r2d
|
||||
|
|
|
@ -1,5 +1,5 @@
|
|||
# AUTO GENERATED FROM environment.py-2.7.yml, DO NOT MANUALLY MODIFY
|
||||
# Frozen on 2018-09-07 17:36:45 UTC
|
||||
# Frozen on 2018-09-17 08:27:26 UTC
|
||||
name: r2d
|
||||
channels:
|
||||
- conda-forge
|
||||
|
|
|
@ -1,32 +1,21 @@
|
|||
# AUTO GENERATED FROM environment.py-3.5.yml, DO NOT MANUALLY MODIFY
|
||||
# Frozen on 2018-09-07 17:39:09 UTC
|
||||
# Frozen on 2018-09-17 08:33:33 UTC
|
||||
name: r2d
|
||||
channels:
|
||||
- conda-forge
|
||||
- defaults
|
||||
- conda-forge/label/broken
|
||||
dependencies:
|
||||
- appdirs=1.4.3=py_1
|
||||
- asn1crypto=0.24.0=py35_3
|
||||
- attrs=18.2.0=py_0
|
||||
- automat=0.7.0=py_1
|
||||
- backcall=0.1.0=py_0
|
||||
- bleach=2.1.4=py_1
|
||||
- bzip2=1.0.6=h470a237_2
|
||||
- ca-certificates=2018.8.24=ha4d7672_0
|
||||
- certifi=2018.8.24=py35_1
|
||||
- cffi=1.11.5=py35h5e8e0c9_1
|
||||
- constantly=15.1.0=py_0
|
||||
- cryptography=2.3.1=py35hdffb7b8_0
|
||||
- cryptography-vectors=2.3.1=py35_0
|
||||
- decorator=4.3.0=py_0
|
||||
- defusedxml=0.5.0=py35_0
|
||||
- entrypoints=0.2.3=py35_2
|
||||
- gmp=6.1.2=hfc679d8_0
|
||||
- html5lib=1.0.1=py_0
|
||||
- hyperlink=17.3.1=py_0
|
||||
- idna=2.7=py35_2
|
||||
- incremental=17.5.0=py_0
|
||||
- ipykernel=4.9.0=py35_0
|
||||
- ipython=6.5.0=py35_0
|
||||
- ipython_genutils=0.2.0=py_1
|
||||
|
@ -36,7 +25,7 @@ dependencies:
|
|||
- jsonschema=2.6.0=py35_2
|
||||
- jupyter_client=5.2.3=py_1
|
||||
- jupyter_core=4.4.0=py_0
|
||||
- jupyterlab=0.34.0=py35_0
|
||||
- jupyterlab=0.34.9=py35_0
|
||||
- jupyterlab_launcher=0.13.1=py_2
|
||||
- libffi=3.2.1=hfc679d8_5
|
||||
- libgcc-ng=7.2.0=hdf63c60_3
|
||||
|
@ -44,32 +33,26 @@ dependencies:
|
|||
- libstdcxx-ng=7.2.0=hdf63c60_3
|
||||
- markupsafe=1.0=py35h470a237_1
|
||||
- mistune=0.8.3=py35h470a237_2
|
||||
- nbconvert=5.4.0=0
|
||||
- nbconvert=5.4.0=1
|
||||
- nbformat=4.4.0=py_1
|
||||
- ncurses=6.1=hfc679d8_1
|
||||
- notebook=5.6.0=py35_1
|
||||
- openssl=1.0.2p=h470a237_0
|
||||
- pandoc=2.2.2=1
|
||||
- pandoc=1.19.2=0
|
||||
- pandocfilters=1.4.2=py_1
|
||||
- parso=0.3.1=py_0
|
||||
- pexpect=4.6.0=py35_0
|
||||
- pickleshare=0.7.4=py35_0
|
||||
- pip=18.0=py35_1
|
||||
- prometheus_client=0.3.0=py_0
|
||||
- prometheus_client=0.3.1=py_1
|
||||
- prompt_toolkit=1.0.15=py_1
|
||||
- ptyprocess=0.6.0=py35_0
|
||||
- pyasn1=0.4.4=py_0
|
||||
- pyasn1-modules=0.2.1=py_0
|
||||
- pycparser=2.18=py_1
|
||||
- pygments=2.2.0=py_1
|
||||
- pyhamcrest=1.9.0=py_2
|
||||
- pyopenssl=18.0.0=py35_0
|
||||
- python=3.5.5=h5001a0f_2
|
||||
- python-dateutil=2.7.3=py_0
|
||||
- pyzmq=17.1.2=py35hae99301_0
|
||||
- readline=7.0=haf1bffa_1
|
||||
- send2trash=1.5.0=py_0
|
||||
- service_identity=17.0.0=py_0
|
||||
- setuptools=40.2.0=py35_0
|
||||
- simplegeneric=0.8.1=py_1
|
||||
- six=1.11.0=py35_1
|
||||
|
@ -79,7 +62,6 @@ dependencies:
|
|||
- tk=8.6.8=0
|
||||
- tornado=4.5.3=py35_0
|
||||
- traitlets=4.3.2=py35_0
|
||||
- twisted=18.7.0=py35h470a237_1
|
||||
- wcwidth=0.1.7=py_1
|
||||
- webencodings=0.5.1=py_1
|
||||
- wheel=0.31.1=py35_1
|
||||
|
@ -87,7 +69,6 @@ dependencies:
|
|||
- xz=5.2.4=h470a237_1
|
||||
- zeromq=4.2.5=hfc679d8_5
|
||||
- zlib=1.2.11=h470a237_3
|
||||
- zope.interface=4.5.0=py35h470a237_1
|
||||
- pip:
|
||||
- nteract-on-jupyter==1.9.6
|
||||
prefix: /opt/conda/envs/r2d
|
||||
|
|
|
@ -1,32 +1,21 @@
|
|||
# AUTO GENERATED FROM environment.py-3.6.yml, DO NOT MANUALLY MODIFY
|
||||
# Frozen on 2018-09-07 17:44:07 UTC
|
||||
# Frozen on 2018-09-17 08:36:41 UTC
|
||||
name: r2d
|
||||
channels:
|
||||
- conda-forge
|
||||
- defaults
|
||||
- conda-forge/label/broken
|
||||
dependencies:
|
||||
- appdirs=1.4.3=py_1
|
||||
- asn1crypto=0.24.0=py36_3
|
||||
- attrs=18.2.0=py_0
|
||||
- automat=0.7.0=py_1
|
||||
- backcall=0.1.0=py_0
|
||||
- bleach=2.1.4=py_1
|
||||
- bzip2=1.0.6=h470a237_2
|
||||
- ca-certificates=2018.8.24=ha4d7672_0
|
||||
- certifi=2018.8.24=py36_1
|
||||
- cffi=1.11.5=py36h5e8e0c9_1
|
||||
- constantly=15.1.0=py_0
|
||||
- cryptography=2.3.1=py36hdffb7b8_0
|
||||
- cryptography-vectors=2.3.1=py36_0
|
||||
- decorator=4.3.0=py_0
|
||||
- defusedxml=0.5.0=py36_0
|
||||
- entrypoints=0.2.3=py36_2
|
||||
- gmp=6.1.2=hfc679d8_0
|
||||
- html5lib=1.0.1=py_0
|
||||
- hyperlink=17.3.1=py_0
|
||||
- idna=2.7=py36_2
|
||||
- incremental=17.5.0=py_0
|
||||
- ipykernel=4.9.0=py36_0
|
||||
- ipython=6.5.0=py36_0
|
||||
- ipython_genutils=0.2.0=py_1
|
||||
|
@ -36,7 +25,7 @@ dependencies:
|
|||
- jsonschema=2.6.0=py36_2
|
||||
- jupyter_client=5.2.3=py_1
|
||||
- jupyter_core=4.4.0=py_0
|
||||
- jupyterlab=0.34.0=py36_0
|
||||
- jupyterlab=0.34.9=py36_0
|
||||
- jupyterlab_launcher=0.13.1=py_2
|
||||
- libffi=3.2.1=hfc679d8_5
|
||||
- libgcc-ng=7.2.0=hdf63c60_3
|
||||
|
@ -44,32 +33,26 @@ dependencies:
|
|||
- libstdcxx-ng=7.2.0=hdf63c60_3
|
||||
- markupsafe=1.0=py36h470a237_1
|
||||
- mistune=0.8.3=py36h470a237_2
|
||||
- nbconvert=5.4.0=0
|
||||
- nbconvert=5.4.0=1
|
||||
- nbformat=4.4.0=py_1
|
||||
- ncurses=6.1=hfc679d8_1
|
||||
- notebook=5.6.0=py36_1
|
||||
- openssl=1.0.2p=h470a237_0
|
||||
- pandoc=2.2.2=1
|
||||
- pandoc=1.19.2=0
|
||||
- pandocfilters=1.4.2=py_1
|
||||
- parso=0.3.1=py_0
|
||||
- pexpect=4.6.0=py36_0
|
||||
- pickleshare=0.7.4=py36_0
|
||||
- pip=18.0=py36_1
|
||||
- prometheus_client=0.3.0=py_0
|
||||
- prometheus_client=0.3.1=py_1
|
||||
- prompt_toolkit=1.0.15=py_1
|
||||
- ptyprocess=0.6.0=py36_0
|
||||
- pyasn1=0.4.4=py_0
|
||||
- pyasn1-modules=0.2.1=py_0
|
||||
- pycparser=2.18=py_1
|
||||
- pygments=2.2.0=py_1
|
||||
- pyhamcrest=1.9.0=py_2
|
||||
- pyopenssl=18.0.0=py36_0
|
||||
- python=3.6.6=h5001a0f_0
|
||||
- python-dateutil=2.7.3=py_0
|
||||
- pyzmq=17.1.2=py36hae99301_0
|
||||
- readline=7.0=haf1bffa_1
|
||||
- send2trash=1.5.0=py_0
|
||||
- service_identity=17.0.0=py_0
|
||||
- setuptools=40.2.0=py36_0
|
||||
- simplegeneric=0.8.1=py_1
|
||||
- six=1.11.0=py36_1
|
||||
|
@ -79,7 +62,6 @@ dependencies:
|
|||
- tk=8.6.8=0
|
||||
- tornado=4.5.3=py36_0
|
||||
- traitlets=4.3.2=py36_0
|
||||
- twisted=18.7.0=py36h470a237_1
|
||||
- wcwidth=0.1.7=py_1
|
||||
- webencodings=0.5.1=py_1
|
||||
- wheel=0.31.1=py36_1
|
||||
|
@ -87,7 +69,6 @@ dependencies:
|
|||
- xz=5.2.4=h470a237_1
|
||||
- zeromq=4.2.5=hfc679d8_5
|
||||
- zlib=1.2.11=h470a237_3
|
||||
- zope.interface=4.5.0=py36h470a237_1
|
||||
- pip:
|
||||
- nteract-on-jupyter==1.9.6
|
||||
prefix: /opt/conda/envs/r2d
|
||||
|
|
|
@ -0,0 +1,74 @@
|
|||
# AUTO GENERATED FROM environment.py-3.7.yml, DO NOT MANUALLY MODIFY
|
||||
# Frozen on 2018-09-17 08:29:40 UTC
|
||||
name: r2d
|
||||
channels:
|
||||
- conda-forge
|
||||
- defaults
|
||||
- conda-forge/label/broken
|
||||
dependencies:
|
||||
- backcall=0.1.0=py_0
|
||||
- bleach=2.1.4=py_1
|
||||
- bzip2=1.0.6=h470a237_2
|
||||
- ca-certificates=2018.8.24=ha4d7672_0
|
||||
- certifi=2018.4.16=py37_0
|
||||
- decorator=4.3.0=py_0
|
||||
- entrypoints=0.2.3=py37_2
|
||||
- gmp=6.1.2=hfc679d8_0
|
||||
- html5lib=1.0.1=py_0
|
||||
- ipykernel=4.8.2=py37_0
|
||||
- ipython=6.5.0=py37_0
|
||||
- ipython_genutils=0.2.0=py_1
|
||||
- jedi=0.12.1=py37_0
|
||||
- jinja2=2.10=py_1
|
||||
- jsonschema=2.6.0=py37_2
|
||||
- jupyter_client=5.2.3=py_1
|
||||
- jupyter_core=4.4.0=py_0
|
||||
- jupyterlab_launcher=0.13.1=py_2
|
||||
- libffi=3.2.1=hfc679d8_5
|
||||
- libgcc-ng=7.2.0=hdf63c60_3
|
||||
- libsodium=1.0.16=h470a237_1
|
||||
- libstdcxx-ng=7.2.0=hdf63c60_3
|
||||
- markupsafe=1.0=py37h470a237_1
|
||||
- mistune=0.8.3=py_0
|
||||
- nbconvert=5.4.0=1
|
||||
- nbformat=4.4.0=py_1
|
||||
- ncurses=6.1=hfc679d8_1
|
||||
- notebook=5.6.0=py37_1
|
||||
- openssl=1.0.2p=h470a237_0
|
||||
- pandoc=1.19.2=0
|
||||
- pandocfilters=1.4.2=py_1
|
||||
- parso=0.3.1=py_0
|
||||
- pexpect=4.6.0=py37_0
|
||||
- pickleshare=0.7.4=py37_0
|
||||
- pip=18.0=py37_1
|
||||
- prometheus_client=0.3.1=py_1
|
||||
- prompt_toolkit=1.0.15=py_1
|
||||
- ptyprocess=0.6.0=py37_0
|
||||
- pygments=2.2.0=py_1
|
||||
- python=3.7.0=h5001a0f_1
|
||||
- python-dateutil=2.7.3=py_0
|
||||
- pyzmq=17.1.2=py37hae99301_0
|
||||
- readline=7.0=haf1bffa_1
|
||||
- send2trash=1.5.0=py_0
|
||||
- setuptools=40.2.0=py37_0
|
||||
- simplegeneric=0.8.1=py_1
|
||||
- six=1.11.0=py37_1
|
||||
- sqlite=3.24.0=h2f33b56_1
|
||||
- terminado=0.8.1=py37_1
|
||||
- testpath=0.3.1=py37_1
|
||||
- tk=8.6.8=0
|
||||
- traitlets=4.3.2=py37_0
|
||||
- wcwidth=0.1.7=py_1
|
||||
- webencodings=0.5.1=py_1
|
||||
- wheel=0.31.1=py37_1
|
||||
- widgetsnbextension=3.4.1=py37_0
|
||||
- xz=5.2.4=h470a237_1
|
||||
- zeromq=4.2.5=hfc679d8_5
|
||||
- zlib=1.2.11=h470a237_3
|
||||
- defusedxml=0.5.0=py37_1
|
||||
- ipywidgets=7.2.1=py37_0
|
||||
- jupyterlab=0.34.9=py37_0
|
||||
- tornado=4.5.3=py37_0
|
||||
- pip:
|
||||
- nteract-on-jupyter==1.9.6
|
||||
prefix: /opt/conda/envs/r2d
|
|
@ -0,0 +1,11 @@
|
|||
# AUTO GENERATED FROM environment.yml, DO NOT MANUALLY MODIFY
|
||||
# Generated on 2018-09-17 08:29:40 UTC
|
||||
dependencies:
|
||||
- python=3.7.*
|
||||
- ipywidgets==7.2.1
|
||||
- jupyterlab==0.34.9
|
||||
- nbconvert==5.4.0
|
||||
- tornado==4.5.3
|
||||
- notebook==5.6.0
|
||||
- pip:
|
||||
- nteract_on_jupyter==1.9.6
|
|
@ -1,7 +1,8 @@
|
|||
dependencies:
|
||||
- python=3.6.*
|
||||
- ipywidgets==7.2.1
|
||||
- jupyterlab==0.34.0
|
||||
- jupyterlab==0.34.9
|
||||
- nbconvert==5.4.0
|
||||
- tornado==4.5.3
|
||||
- notebook==5.6.0
|
||||
- pip:
|
||||
|
|
|
@ -100,7 +100,7 @@ def set_python(py_env_file, py):
|
|||
|
||||
if __name__ == '__main__':
|
||||
# allow specifying which Pythons to update on argv
|
||||
pys = sys.argv[1:] or ('2.7', '3.5', '3.6')
|
||||
pys = sys.argv[1:] or ('2.7', '3.7', '3.5', '3.6')
|
||||
for py in pys:
|
||||
env_file = ENV_FILE_T.format(py=py)
|
||||
set_python(env_file, py)
|
||||
|
|
|
@ -0,0 +1,2 @@
|
|||
dependencies:
|
||||
- python=3.7
|
|
@ -0,0 +1,4 @@
|
|||
#!/usr/bin/env python
|
||||
import sys
|
||||
|
||||
assert sys.version_info[:2] == (3, 7), sys.version
|
Ładowanie…
Reference in New Issue