kopia lustrzana https://github.com/OpenDroneMap/ODM
Added lidar2dems superbuild module, modified dockerfile, configure.sh to install lidar2dems deps
Piero Toffanin
rodzic
5fb9967368
commit
fed4cb95dc
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@ -1,3 +0,0 @@
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[submodule "modules/lidar2dems"]
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path = modules/lidar2dems
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url = https://github.com/pierotofy/lidar2dems
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@ -19,7 +19,7 @@ jhead liblas-bin python-matplotlib libatlas-base-dev libgmp-dev libmpfr-dev swig
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RUN apt-get remove libdc1394-22-dev
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RUN pip install --upgrade pip
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RUN pip install setuptools
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RUN pip install -U PyYAML exifread gpxpy xmltodict catkin-pkg appsettings https://github.com/Applied-GeoSolutions/gippy/archive/v0.3.9.tar.gz
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RUN pip install -U PyYAML exifread gpxpy xmltodict catkin-pkg appsettings https://github.com/pierotofy/gippy/archive/v0.3.9.tar.gz
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ENV PYTHONPATH="$PYTHONPATH:/code/SuperBuild/install/lib/python2.7/dist-packages"
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ENV PYTHONPATH="$PYTHONPATH:/code/SuperBuild/src/opensfm"
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@ -49,12 +49,6 @@ COPY VERSION /code/VERSION
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RUN cd SuperBuild && mkdir build && cd build && cmake .. && make -j$(nproc) && cd ../.. && mkdir build && cd build && cmake .. && make -j$(nproc)
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# Update and initialize git submodules
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RUN git submodule update --init
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# Setup lidar2dems
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RUN CPLUS_INCLUDE_PATH=/usr/include/gdal C_INCLUDE_PATH=/usr/include/gdal /code/modules/lidar2dems/setup.py install && ln -s /code/SuperBuild/build/pdal/bin/pdal /usr/bin/pdal
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RUN apt-get -y remove libgl1-mesa-dri git cmake python-pip build-essential
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RUN apt-get install -y libvtk5-dev
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@ -114,6 +114,7 @@ set(custom_libs OpenGV
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Ecto
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PDAL
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MvsTexturing
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Lidar2dems
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)
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# Dependencies of the SLAM module
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@ -0,0 +1,25 @@
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set(_proj_name lidar2dems)
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set(_SB_BINARY_DIR "${SB_BINARY_DIR}/${_proj_name}")
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ExternalProject_Add(${_proj_name}
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PREFIX ${_SB_BINARY_DIR}
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TMP_DIR ${_SB_BINARY_DIR}/tmp
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STAMP_DIR ${_SB_BINARY_DIR}/stamp
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#--Download step--------------
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DOWNLOAD_DIR ${SB_DOWNLOAD_DIR}/${_proj_name}
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URL https://github.com/pierotofy/lidar2dems/archive/master.zip
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URL_MD5 6cfe2d081cda1680e6e98a9925651b03
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#--Update/Patch step----------
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UPDATE_COMMAND ""
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#--Configure step-------------
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SOURCE_DIR ${SB_SOURCE_DIR}/${_proj_name}
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CONFIGURE_COMMAND ""
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#--Build step-----------------
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BUILD_COMMAND ""
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#--Install step---------------
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INSTALL_COMMAND "${SB_SOURCE_DIR}/${_proj_name}/install.sh"
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#--Output logging-------------
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LOG_DOWNLOAD OFF
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LOG_CONFIGURE OFF
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LOG_BUILD OFF
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)
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13
configure.sh
13
configure.sh
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@ -72,7 +72,7 @@ install() {
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appsettings
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echo "Installing CGAL dependencies"
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sudo apt-get install libgmp-dev libmpfr-dev
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sudo apt-get install -y -qq libgmp-dev libmpfr-dev
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echo "Installing Ecto Dependencies"
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sudo pip install -U catkin-pkg
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@ -92,17 +92,8 @@ install() {
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libboost-log-dev \
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libxslt-dev
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echo "Updating and initializing git submodules"
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git submodule update --init
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sudo pip install -U https://github.com/pierotofy/gippy/archive/v0.3.9.tar.gz
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echo "Installing lidar2dems"
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cd ${RUNPATH}/modules/lidar2dems
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CPLUS_INCLUDE_PATH=/usr/include/gdal C_INCLUDE_PATH=/usr/include/gdal ./setup.py install
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if [ ! -f /usr/bin/pdal ]; then
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ln -s ${RUNPATH}/SuperBuild/build/pdal/bin/pdal /usr/bin/pdal
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fi
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echo "Compiling SuperBuild"
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cd ${RUNPATH}/SuperBuild
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mkdir -p build && cd build
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@ -1 +0,0 @@
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Subproject commit fe0710bd68e6add3be5621e94f20f56c1e99fd00
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@ -196,7 +196,7 @@ class ODM_GeoRef(object):
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system.run('{bin}/pdal pipeline -i {json} --readers.ply.filename={f_in} '
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'--writers.las.filename={f_out}'.format(**kwargs))
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def convert_to_dem(self, _file, _file_out, pdalJSON, sample_radius, gdal_res, gdal_radius):
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def convert_to_dem(self, _file, _file_out, sample_radius, gdal_res, gdal_radius):
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# Check if exists f_in
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if not io.file_exists(_file):
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log.ODM_ERROR('LAS file does not exist')
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@ -208,36 +208,9 @@ class ODM_GeoRef(object):
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'sample_radius': sample_radius,
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'gdal_res': gdal_res,
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'gdal_radius': gdal_radius,
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'f_out': _file_out,
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'json': pdalJSON
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'f_out': _file_out
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}
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pipelineJSON = '{{' \
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' "pipeline":[' \
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' "input.las",' \
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' {{' \
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' "type":"filters.sample",' \
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' "radius":"{sample_radius}"' \
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' }},' \
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' {{' \
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' "type":"filters.pmf"' \
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' }},' \
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' {{' \
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' "type":"filters.range",' \
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' "limits":"Classification[2:2]"' \
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' }},' \
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' {{' \
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' "resolution": {gdal_res},' \
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' "radius": {gdal_radius},' \
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' "output_type":"idw",' \
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' "filename":"outputfile.tif"' \
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' }}' \
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' ]' \
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'}}'.format(**kwargs)
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with open(pdalJSON, 'w') as f:
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f.write(pipelineJSON)
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system.run('{bin}/pdal pipeline {json} --readers.las.filename={f_in} '
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'--writers.gdal.filename={f_out}'.format(**kwargs))
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@ -454,8 +427,6 @@ class ODM_Tree(object):
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self.odm_georeferencing, 'odm_georeferenced_model.las')
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self.odm_georeferencing_dem = io.join_paths(
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self.odm_georeferencing, 'odm_georeferencing_model_dem.tif')
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self.odm_georeferencing_dem_json = io.join_paths(
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self.odm_georeferencing, 'dem.json')
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# odm_orthophoto
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self.odm_orthophoto_file = io.join_paths(self.odm_orthophoto, 'odm_orthophoto.png')
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@ -179,7 +179,6 @@ class ODMGeoreferencingCell(ecto.Cell):
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if args.dem:
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demcreated = geo_ref.convert_to_dem(tree.odm_georeferencing_model_las,
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tree.odm_georeferencing_dem,
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tree.odm_georeferencing_dem_json,
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self.params.sample_radius,
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self.params.gdal_res,
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self.params.gdal_radius)
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