Skip DSM smoothing in 2.5D model with fast-orthophoto

opendm/dem/commands.py

@@ -35,7 +35,8 @@ error = None
 
 def create_dem(input_point_cloud, dem_type, output_type='max', radiuses=['0.56'], gapfill=True,
                 outdir='', resolution=0.1, max_workers=1, max_tile_size=2048,
-                verbose=False, decimation=None, keep_unfilled_copy=False):
+                verbose=False, decimation=None, keep_unfilled_copy=False,
+                apply_smoothing=True):
     """ Create DEM from multiple radii, and optionally gapfill """
     global error
     error = None
@@ -238,9 +239,12 @@ def create_dem(input_point_cloud, dem_type, output_type='max', radiuses=['0.56']
                 '-co NUM_THREADS={threads} '
                 '--config GDAL_CACHEMAX {max_memory}% '
                 '{tiles_vrt} {geotiff}'.format(**kwargs))
-        
+
-    post_process(geotiff_path, output_path)
+    if apply_smoothing:
-    os.remove(geotiff_path)
+        median_smoothing(geotiff_path, output_path)
+        os.remove(geotiff_path)
+    else:
+        os.rename(geotiff_path, output_path)
 
     if os.path.exists(geotiff_tmp_path):
         if not keep_unfilled_copy: 
@@ -278,14 +282,14 @@ def compute_euclidean_map(geotiff_path, output_path, overwrite=False):
         return output_path
 
 
-def post_process(geotiff_path, output_path, smoothing_iterations=1):
+def median_smoothing(geotiff_path, output_path, smoothing_iterations=1):
     """ Apply median smoothing """
     start = datetime.now()
 
     if not os.path.exists(geotiff_path):
         raise Exception('File %s does not exist!' % geotiff_path)
 
-    log.ODM_INFO('Starting post processing (smoothing)...')
+    log.ODM_INFO('Starting smoothing...')
 
     with rasterio.open(geotiff_path) as img:
         nodata = img.nodatavals[0]
@@ -324,6 +328,6 @@ def post_process(geotiff_path, output_path, smoothing_iterations=1):
             else:
                 imgout.write(arr.astype(dtype), 1)
     
-    log.ODM_INFO('Completed post processing to create %s in %s' % (os.path.relpath(output_path), datetime.now() - start))
+    log.ODM_INFO('Completed smoothing to create %s in %s' % (os.path.relpath(output_path), datetime.now() - start))
 
     return output_path

opendm/mesh.py

@@ -7,7 +7,7 @@ from opendm import context
 from scipy import signal, ndimage
 import numpy as np
 
-def create_25dmesh(inPointCloud, outMesh, dsm_radius=0.07, dsm_resolution=0.05, depth=8, samples=1, maxVertexCount=100000, verbose=False, available_cores=None, method='gridded'):
+def create_25dmesh(inPointCloud, outMesh, dsm_radius=0.07, dsm_resolution=0.05, depth=8, samples=1, maxVertexCount=100000, verbose=False, available_cores=None, method='gridded', smooth_dsm=True):
     # Create DSM from point cloud
 
     # Create temporary directory
@@ -31,7 +31,8 @@ def create_25dmesh(inPointCloud, outMesh, dsm_radius=0.07, dsm_resolution=0.05,
             outdir=tmp_directory,
             resolution=dsm_resolution,
             verbose=verbose,
-            max_workers=available_cores
+            max_workers=available_cores,
+            apply_smoothing=smooth_dsm
         )
 
     if method == 'gridded':

stages/odm_meshing.py

@@ -68,7 +68,8 @@ class ODMeshingStage(types.ODM_Stage):
                     samples=self.params.get('samples'),
                     verbose=self.params.get('verbose'),
                     available_cores=args.max_concurrency,
-                    method='poisson' if args.fast_orthophoto else 'gridded')
+                    method='poisson' if args.fast_orthophoto else 'gridded',
+                    smooth_dsm=not args.fast_orthophoto)
           else:
               log.ODM_WARNING('Found a valid ODM 2.5D Mesh file in: %s' %
                               tree.odm_25dmesh)